Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm12948-201ENSMUST00000119406 682 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm16219-201ENSMUST00000120096 274 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm25830-201ENSMUST00000158923 132 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm8181-201ENSMUST00000062242 669 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhac2Q91Y09 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Gm12663-201ENSMUST00000118481 958 ntBASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Gm25343-201ENSMUST00000157460 107 ntBASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Mir6941-201ENSMUST00000184711 59 ntBASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Gm18065-201ENSMUST00000221395 526 ntBASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhac2Q91Y09 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.46□□□□□ -0.41
Pcdhac2Q91Y09 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms