Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Mir877-201ENSMUST00000104738 85 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm27530-201ENSMUST00000184096 98 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm45186-201ENSMUST00000206874 478 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb13Q91Y06 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm8566-201ENSMUST00000120174 465 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm5708-201ENSMUST00000196289 886 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.69□□□□□ -0.54
Pcdhb13Q91Y06 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb13Q91Y06 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms