Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gm14274-201ENSMUST00000117182 615 ntBASIC16.22■□□□□ 0.19
Cd109Q8R422 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC16.22■□□□□ 0.19
Cd109Q8R422 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gm4753-201ENSMUST00000188327 1255 ntBASIC16.22■□□□□ 0.19
Cd109Q8R422 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cd109Q8R422 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 AC154639.1-201ENSMUST00000224393 2849 ntBASIC16.22■□□□□ 0.19
Cd109Q8R422 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd109Q8R422 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd109Q8R422 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm4917-201ENSMUST00000121452 650 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Mup-ps29-201ENSMUST00000122281 202 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm15620-201ENSMUST00000122949 270 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm31274-201ENSMUST00000197356 229 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm43249-201ENSMUST00000200464 458 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm5822-201ENSMUST00000161562 1378 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Gm7104-201ENSMUST00000179741 2532 ntBASIC16.21■□□□□ 0.19
Cd109Q8R422 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Cd109Q8R422 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd109Q8R422 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd109Q8R422 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd109Q8R422 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Mir671-201ENSMUST00000102432 98 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm13019-201ENSMUST00000120000 276 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm15196-201ENSMUST00000121406 482 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm17221-201ENSMUST00000163909 481 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm17073-201ENSMUST00000168069 556 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Mir6941-201ENSMUST00000184711 59 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm44755-201ENSMUST00000207830 2102 ntBASIC16.2■□□□□ 0.18
Cd109Q8R422 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cd109Q8R422 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cd109Q8R422 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cd109Q8R422 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms