Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim52Q8CDV4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Btrc-209ENSMUST00000224478 2194 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm25562-201ENSMUST00000104608 133 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Snord23-201ENSMUST00000116828 109 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm12389-201ENSMUST00000117696 418 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm12783-201ENSMUST00000121425 397 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm26989-201ENSMUST00000182608 749 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm26976-201ENSMUST00000182929 908 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm9102-201ENSMUST00000219250 465 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim52Q8CDV4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm3828-201ENSMUST00000121817 257 ntBASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm22146-201ENSMUST00000157397 288 ntBASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm8181-201ENSMUST00000062242 669 ntBASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Gm25580-201ENSMUST00000083409 327 ntBASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim52Q8CDV4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim52Q8CDV4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim52Q8CDV4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms