Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm2383-201ENSMUST00000181461 807 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lrif1Q8CDD9 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm8885-201ENSMUST00000189382 598 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm18212-201ENSMUST00000211678 889 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm10312-201ENSMUST00000078515 489 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lrif1Q8CDD9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms