Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm15566-201ENSMUST00000121130 590 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm9540-201ENSMUST00000188230 478 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm29499-201ENSMUST00000189151 486 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm28329-201ENSMUST00000191208 689 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm29171-201ENSMUST00000191397 486 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm7848-201ENSMUST00000210739 718 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trub1Q8C0D0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm13809-201ENSMUST00000117921 597 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm11941-201ENSMUST00000119904 610 ntBASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trub1Q8C0D0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms