Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm13600-201ENSMUST00000117949 744 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm14270-201ENSMUST00000118388 846 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm11960-201ENSMUST00000122068 925 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rd3Q8BRE0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gm43380-201ENSMUST00000200421 220 ntBASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gm10263-201ENSMUST00000085163 300 ntBASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rd3Q8BRE0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rd3Q8BRE0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms