Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm17812-201ENSMUST00000204935 318 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm5705-201ENSMUST00000066241 711 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm15004-201ENSMUST00000119192 630 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm5616-201ENSMUST00000165252 384 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm17376-201ENSMUST00000166016 84 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm8741-201ENSMUST00000174736 384 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm27627-201ENSMUST00000183644 150 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 AY036118-201ENSMUST00000200021 923 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm45224-201ENSMUST00000208203 414 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm2553-201ENSMUST00000215986 605 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc40Q8BI79 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms