Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf38Q8BI21 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm25668-201ENSMUST00000157700 129 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm13097-201ENSMUST00000210722 397 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Btrc-209ENSMUST00000224478 2194 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf38Q8BI21 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.15□□□□□ -0.63
Rnf38Q8BI21 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf38Q8BI21 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rnf38Q8BI21 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf38Q8BI21 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms