Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm11700-201ENSMUST00000119409 403 ntBASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Samm50Q8BGH2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm8956-201ENSMUST00000203939 825 ntBASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.53□□□□□ -0.24
Samm50Q8BGH2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Samm50Q8BGH2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Samm50Q8BGH2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm5419-201ENSMUST00000119301 527 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Mir5120-201ENSMUST00000175020 78 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm43138-201ENSMUST00000199123 708 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm18753-201ENSMUST00000201000 566 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm4157-201ENSMUST00000211647 679 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm270-201ENSMUST00000223010 976 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm10254-201ENSMUST00000052888 867 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm26448-201ENSMUST00000082446 203 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Rgr-203ENSMUST00000225070 4704 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 BC043934-202ENSMUST00000185694 2356 ntBASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Samm50Q8BGH2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms