Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm29499-201ENSMUST00000189151 486 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm28329-201ENSMUST00000191208 689 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm29171-201ENSMUST00000191397 486 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm6108-201ENSMUST00000208365 367 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gm8420-201ENSMUST00000097103 598 ntBASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atg4bQ8BGE6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Mir5120-201ENSMUST00000175020 78 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm9540-201ENSMUST00000188230 478 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm37466-201ENSMUST00000195692 652 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atg4bQ8BGE6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Rgr-203ENSMUST00000225070 4704 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm3150-201ENSMUST00000166418 204 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm37835-201ENSMUST00000193305 361 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms