Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prpf38bQ80SY5 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm42657-201ENSMUST00000201746 211 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Prpf38bQ80SY5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Prpf38bQ80SY5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm25063-201ENSMUST00000104666 94 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm11949-201ENSMUST00000117640 372 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm23119-201ENSMUST00000158610 140 ntBASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prpf38bQ80SY5 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms