Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm11952-201ENSMUST00000121172 821 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm25951-201ENSMUST00000175330 64 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm9507-202ENSMUST00000180157 654 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Mir6941-201ENSMUST00000184711 59 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm7589-201ENSMUST00000085631 534 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Gm13047-201ENSMUST00000117116 815 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm14234-201ENSMUST00000119539 845 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm17214-201ENSMUST00000164501 541 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm5529-201ENSMUST00000165691 891 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm18801-201ENSMUST00000186616 536 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm5870-201ENSMUST00000196461 282 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm7880-201ENSMUST00000203748 871 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm8181-201ENSMUST00000062242 669 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm4917-201ENSMUST00000121452 650 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm27956-201ENSMUST00000175604 260 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup98Q6PFD9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm6158-201ENSMUST00000109467 904 ntBASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm12463-201ENSMUST00000118271 849 ntBASIC13.35□□□□□ -0.27
Nup98Q6PFD9 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm9574-201ENSMUST00000173127 845 ntBASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm40414-201ENSMUST00000197608 481 ntBASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Gm2448-201ENSMUST00000207080 559 ntBASIC13.35□□□□□ -0.27
Nup98Q6PFD9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup98Q6PFD9 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms