Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm38266-201ENSMUST00000194931 421 ntBASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Gm3961-201ENSMUST00000204425 994 ntBASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.57□□□□□ -0.72
Smarcd3Q6P9Z1 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm6334-201ENSMUST00000207083 228 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm44651-201ENSMUST00000207343 372 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm5705-201ENSMUST00000066241 711 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd3Q6P9Z1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms