Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm22614-201ENSMUST00000178300 165 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm9797-202ENSMUST00000218003 294 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gm44651-201ENSMUST00000207343 372 ntBASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt39Q6IFX4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm3329-201ENSMUST00000159873 556 ntBASIC12.72□□□□□ -0.37
Krt39Q6IFX4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms