Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cln3Q61124 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Mir453-201ENSMUST00000104732 82 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Gm12663-201ENSMUST00000118481 958 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.67□□□□□ -0.38
Cln3Q61124 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Gm17070-201ENSMUST00000170463 784 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Gm26976-201ENSMUST00000182929 908 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.67□□□□□ -0.38
Cln3Q61124 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Gm7902-201ENSMUST00000198842 947 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Gm45071-201ENSMUST00000205353 571 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Gm45072-201ENSMUST00000208673 929 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 AC165260.5-201ENSMUST00000224640 1247 ntBASIC12.67□□□□□ -0.38
Cln3Q61124 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cln3Q61124 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cln3Q61124 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cln3Q61124 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.66□□□□□ -0.38
Cln3Q61124 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cln3Q61124 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Cln3Q61124 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Gm7541-201ENSMUST00000118361 535 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Gm12948-201ENSMUST00000119406 682 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Gm13019-201ENSMUST00000120000 276 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Gm13284-201ENSMUST00000121020 547 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.66□□□□□ -0.38
Cln3Q61124 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.66□□□□□ -0.38
Cln3Q61124 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cln3Q61124 Gm5870-201ENSMUST00000196461 282 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.66□□□□□ -0.38
Cln3Q61124 Gm45856-201ENSMUST00000212752 416 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Gm19640-201ENSMUST00000214849 464 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.66□□□□□ -0.38
Cln3Q61124 AC132881.2-201ENSMUST00000225474 709 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Gm26670-202ENSMUST00000226862 340 ntBASIC12.66□□□□□ -0.38
Cln3Q61124 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms