Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm7600-201ENSMUST00000209657 785 ntBASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm25148-201ENSMUST00000104611 123 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm4294-201ENSMUST00000105169 614 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm14395-201ENSMUST00000120494 563 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm9358-201ENSMUST00000183067 927 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Lect2-202ENSMUST00000225183 823 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Erich3-203ENSMUST00000189969 3460 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.37□□□□□ -0.27
Rc3h1Q4VGL6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm14201-201ENSMUST00000117627 289 ntBASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm23153-201ENSMUST00000175323 313 ntBASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm38210-201ENSMUST00000191944 809 ntBASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm6722-201ENSMUST00000221586 390 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms