Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm44967-201ENSMUST00000207047 631 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm8913-201ENSMUST00000209491 641 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.1□□□□□ -0.47
Cul4aQ3TCH7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm6867-201ENSMUST00000219165 425 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cul4aQ3TCH7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cul4aQ3TCH7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms