Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm11801-201ENSMUST00000117807 746 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm4310-201ENSMUST00000177847 889 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm5621-201ENSMUST00000187303 640 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm37458-201ENSMUST00000194055 410 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm45594-201ENSMUST00000211717 241 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Treml4Q3LRV9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm36943-201ENSMUST00000194422 282 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm5100-201ENSMUST00000195631 589 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.94□□□□□ -0.66
Treml4Q3LRV9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms