Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox9Q04887 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox9Q04887 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox9Q04887 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox9Q04887 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox9Q04887 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm22937-201ENSMUST00000103954 131 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm11475-201ENSMUST00000118482 476 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Gm12986-201ENSMUST00000119037 967 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm25569-201ENSMUST00000157175 131 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Gm25492-201ENSMUST00000157383 129 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox9Q04887 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox9Q04887 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm33707-201ENSMUST00000195135 569 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Gm42660-201ENSMUST00000197733 947 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox9Q04887 Gm7525-201ENSMUST00000219425 454 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox9Q04887 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.96□□□□□ -0.49
Sox9Q04887 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Sox9Q04887 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Sox9Q04887 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox9Q04887 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox9Q04887 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sox9Q04887 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sox9Q04887 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox9Q04887 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox9Q04887 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox9Q04887 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox9Q04887 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox9Q04887 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sox9Q04887 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox9Q04887 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm13827-201ENSMUST00000148801 372 ntBASIC11.95□□□□□ -0.5
Sox9Q04887 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm9630-201ENSMUST00000178304 885 ntBASIC11.95□□□□□ -0.5
Sox9Q04887 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.95□□□□□ -0.5
Sox9Q04887 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox9Q04887 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox9Q04887 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox9Q04887 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.95□□□□□ -0.5
Sox9Q04887 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox9Q04887 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox9Q04887 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox9Q04887 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox9Q04887 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms