Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Mir877-201ENSMUST00000104738 85 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm12857-201ENSMUST00000117678 592 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm24749-201ENSMUST00000157838 343 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm28686-201ENSMUST00000187404 609 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Gm8420-201ENSMUST00000097103 598 ntBASIC11.62□□□□□ -0.55
Pfdn6Q03958 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pfdn6Q03958 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm23596-201ENSMUST00000104304 132 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm15711-201ENSMUST00000118889 535 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm3332-201ENSMUST00000189337 928 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.61□□□□□ -0.55
Pfdn6Q03958 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pfdn6Q03958 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pfdn6Q03958 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms