Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.17□□□□□ -0.62
Msx2Q03358 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.17□□□□□ -0.62
Msx2Q03358 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Msx2Q03358 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 AA474408-201ENSMUST00000098110 3339 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.16□□□□□ -0.62
Msx2Q03358 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Msx2Q03358 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Msx2Q03358 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Msx2Q03358 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Msx2Q03358 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Gm11989-201ENSMUST00000117240 672 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Gm11362-201ENSMUST00000118838 850 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.15□□□□□ -0.62
Msx2Q03358 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Msx2Q03358 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Gm37319-201ENSMUST00000193500 636 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.15□□□□□ -0.62
Msx2Q03358 Gm6439-201ENSMUST00000199849 862 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.15□□□□□ -0.62
Msx2Q03358 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.15□□□□□ -0.62
Msx2Q03358 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Msx2Q03358 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Msx2Q03358 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Msx2Q03358 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Msx2Q03358 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms