Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.36□□□□□ -0.59
Shox2P70390 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.36□□□□□ -0.59
Shox2P70390 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Gm13875-201ENSMUST00000120162 282 ntBASIC11.36□□□□□ -0.59
Shox2P70390 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Gm24845-201ENSMUST00000158034 109 ntBASIC11.36□□□□□ -0.59
Shox2P70390 Gm3890-201ENSMUST00000182416 207 ntBASIC11.36□□□□□ -0.59
Shox2P70390 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Shox2P70390 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.36□□□□□ -0.59
Shox2P70390 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.36□□□□□ -0.59
Shox2P70390 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.36□□□□□ -0.59
Shox2P70390 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shox2P70390 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shox2P70390 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Gm23061-201ENSMUST00000102348 116 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Gm12859-201ENSMUST00000117834 427 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.35□□□□□ -0.59
Shox2P70390 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Gm10268-201ENSMUST00000085340 555 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Shox2P70390 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.35□□□□□ -0.59
Shox2P70390 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.35□□□□□ -0.59
Shox2P70390 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shox2P70390 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shox2P70390 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shox2P70390 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.34□□□□□ -0.59
Shox2P70390 Gm24644-201ENSMUST00000157114 139 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms