Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm5739-201ENSMUST00000208601 1703 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cux2P70298 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cux2P70298 Gm11919-201ENSMUST00000117609 721 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm14633-201ENSMUST00000121152 470 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cux2P70298 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cux2P70298 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cux2P70298 Gm8618-201ENSMUST00000097570 432 ntBASIC18.57■□□□□ 0.56
Cux2P70298 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cux2P70298 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cux2P70298 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Snord17-201ENSMUST00000104526 238 ntBASIC18.56■□□□□ 0.56
Cux2P70298 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC18.56■□□□□ 0.56
Cux2P70298 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Lect2-202ENSMUST00000225183 823 ntBASIC18.56■□□□□ 0.56
Cux2P70298 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cux2P70298 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Gm25514-201ENSMUST00000083860 135 ntBASIC18.56■□□□□ 0.56
Cux2P70298 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.56■□□□□ 0.56
Cux2P70298 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cux2P70298 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux2P70298 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cux2P70298 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux2P70298 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cux2P70298 Gm5764-201ENSMUST00000118817 885 ntBASIC18.55■□□□□ 0.56
Cux2P70298 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux2P70298 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC18.55■□□□□ 0.56
Cux2P70298 Gm9353-201ENSMUST00000200472 604 ntBASIC18.55■□□□□ 0.56
Cux2P70298 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC18.55■□□□□ 0.56
Cux2P70298 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cux2P70298 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC18.55■□□□□ 0.56
Cux2P70298 Gm37324-201ENSMUST00000194500 4504 ntBASIC18.55■□□□□ 0.56
Cux2P70298 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Gm44573-201ENSMUST00000191753 2370 ntBASIC18.54■□□□□ 0.56
Cux2P70298 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC18.54■□□□□ 0.56
Cux2P70298 Gm6939-201ENSMUST00000122029 864 ntBASIC18.54■□□□□ 0.56
Cux2P70298 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC18.54■□□□□ 0.56
Cux2P70298 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Gm37597-201ENSMUST00000191853 382 ntBASIC18.54■□□□□ 0.56
Cux2P70298 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC18.54■□□□□ 0.56
Cux2P70298 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cux2P70298 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC18.53■□□□□ 0.56
Cux2P70298 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC18.53■□□□□ 0.56
Cux2P70298 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC18.53■□□□□ 0.56
Cux2P70298 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Gm5472-201ENSMUST00000178604 1678 ntBASIC18.53■□□□□ 0.56
Cux2P70298 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cux2P70298 Mir1190-201ENSMUST00000116925 96 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms