Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Pdlim4P70271 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pdlim4P70271 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.65□□□□□ -0.87
Pdlim4P70271 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.64□□□□□ -0.87
Pdlim4P70271 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.64□□□□□ -0.87
Pdlim4P70271 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.64□□□□□ -0.87
Pdlim4P70271 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm18734-201ENSMUST00000172937 808 ntBASIC9.64□□□□□ -0.87
Pdlim4P70271 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.64□□□□□ -0.87
Pdlim4P70271 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.64□□□□□ -0.87
Pdlim4P70271 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Pdlim4P70271 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pdlim4P70271 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pdlim4P70271 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Pdlim4P70271 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms