Protein–RNA interactions for Protein: P61961

Ufm1, Ubiquitin-fold modifier 1, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufm1P61961 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ufm1P61961 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.03□□□□□ -0.64
Ufm1P61961 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.03□□□□□ -0.64
Ufm1P61961 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.03□□□□□ -0.64
Ufm1P61961 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.03□□□□□ -0.64
Ufm1P61961 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.03□□□□□ -0.64
Ufm1P61961 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.03□□□□□ -0.64
Ufm1P61961 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Mir8109-201ENSMUST00000184375 117 ntBASIC11.03□□□□□ -0.64
Ufm1P61961 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.03□□□□□ -0.64
Ufm1P61961 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.03□□□□□ -0.64
Ufm1P61961 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.03□□□□□ -0.64
Ufm1P61961 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.03□□□□□ -0.64
Ufm1P61961 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ufm1P61961 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ufm1P61961 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.03□□□□□ -0.64
Ufm1P61961 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.03□□□□□ -0.64
Ufm1P61961 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ufm1P61961 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ufm1P61961 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ufm1P61961 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ufm1P61961 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ufm1P61961 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.02□□□□□ -0.64
Ufm1P61961 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ufm1P61961 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm11509-201ENSMUST00000117358 325 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Gm13296-201ENSMUST00000117854 997 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm4157-201ENSMUST00000211647 679 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm7940-201ENSMUST00000218195 769 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ufm1P61961 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ufm1P61961 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ufm1P61961 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.02□□□□□ -0.65
Ufm1P61961 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ufm1P61961 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms