Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tpm1P58771 Mospd4-201ENSMUST00000180618 576 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.85□□□□□ -0.35
Tpm1P58771 Gm45784-201ENSMUST00000188360 142 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.85□□□□□ -0.35
Tpm1P58771 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tpm1P58771 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tpm1P58771 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.84□□□□□ -0.35
Tpm1P58771 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
Tpm1P58771 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm11989-201ENSMUST00000117240 672 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm11362-201ENSMUST00000118838 850 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.84□□□□□ -0.35
Tpm1P58771 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm17150-201ENSMUST00000165577 381 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm9230-201ENSMUST00000188228 532 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm38314-201ENSMUST00000195709 625 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm43118-201ENSMUST00000199149 775 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm6266-201ENSMUST00000203844 806 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.84□□□□□ -0.35
Tpm1P58771 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tpm1P58771 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tpm1P58771 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tpm1P58771 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tpm1P58771 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Tpm1P58771 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Tpm1P58771 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.83□□□□□ -0.35
Tpm1P58771 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.83□□□□□ -0.35
Tpm1P58771 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.83□□□□□ -0.36
Tpm1P58771 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tpm1P58771 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Gm9192-201ENSMUST00000183221 985 ntBASIC12.83□□□□□ -0.36
Tpm1P58771 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.83□□□□□ -0.36
Tpm1P58771 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.83□□□□□ -0.36
Tpm1P58771 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tpm1P58771 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm1P58771 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms