Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.11□□□□□ -0.15
Tm6sf1P58749 Gm19178-201ENSMUST00000217524 1819 ntBASIC14.11□□□□□ -0.15
Tm6sf1P58749 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm6sf1P58749 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.1□□□□□ -0.15
Tm6sf1P58749 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Mir5132-201ENSMUST00000175166 71 ntBASIC14.1□□□□□ -0.15
Tm6sf1P58749 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.1□□□□□ -0.15
Tm6sf1P58749 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.1□□□□□ -0.15
Tm6sf1P58749 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm6sf1P58749 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm8111-201ENSMUST00000117659 987 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm22846-201ENSMUST00000157706 270 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm23694-201ENSMUST00000179335 110 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.09□□□□□ -0.15
Tm6sf1P58749 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm6sf1P58749 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.08□□□□□ -0.15
Tm6sf1P58749 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.08□□□□□ -0.15
Tm6sf1P58749 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.08□□□□□ -0.15
Tm6sf1P58749 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tm6sf1P58749 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Gm16219-201ENSMUST00000120096 274 ntBASIC14.08□□□□□ -0.16
Tm6sf1P58749 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.08□□□□□ -0.16
Tm6sf1P58749 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.08□□□□□ -0.16
Tm6sf1P58749 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms