Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm11660-201ENSMUST00000120955 412 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.3□□□□□ -0.92
Sssca1P56873 Snora78-201ENSMUST00000158630 128 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.3□□□□□ -0.92
Sssca1P56873 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm19187-201ENSMUST00000206781 892 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Gm45880-201ENSMUST00000213041 853 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Gm10608-202ENSMUST00000213924 676 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Gm2553-201ENSMUST00000215986 605 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Sssca1P56873 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.3□□□□□ -0.92
Sssca1P56873 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm5187-201ENSMUST00000117317 991 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm11425-201ENSMUST00000119608 498 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.29□□□□□ -0.92
Sssca1P56873 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Mir1982-201ENSMUST00000157368 74 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm3096-201ENSMUST00000185770 364 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm43966-201ENSMUST00000203301 612 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Sssca1P56873 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm9396-201ENSMUST00000076703 567 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms