Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm19587-201ENSMUST00000191395 545 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atxn1P54254 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.52□□□□□ -0.57
Atxn1P54254 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.52□□□□□ -0.57
Atxn1P54254 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atxn1P54254 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Atxn1P54254 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.52□□□□□ -0.57
Atxn1P54254 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atxn1P54254 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atxn1P54254 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm11560-201ENSMUST00000117567 948 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm14213-201ENSMUST00000119778 768 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm24248-201ENSMUST00000157321 322 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm12407-201ENSMUST00000180219 324 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Mir6941-201ENSMUST00000184711 59 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm18801-201ENSMUST00000186616 536 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm6855-201ENSMUST00000206307 790 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm18968-201ENSMUST00000221319 862 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atxn1P54254 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.51□□□□□ -0.57
Atxn1P54254 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atxn1P54254 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atxn1P54254 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.5□□□□□ -0.57
Atxn1P54254 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm17070-201ENSMUST00000170463 784 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms