Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.55□□□□□ -0.56
Fdft1P53798 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Fdft1P53798 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fdft1P53798 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Fdft1P53798 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Fdft1P53798 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm11509-201ENSMUST00000117358 325 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.54□□□□□ -0.56
Fdft1P53798 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm37666-201ENSMUST00000194110 866 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Gm43438-201ENSMUST00000198133 379 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.54□□□□□ -0.56
Fdft1P53798 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.54□□□□□ -0.56
Fdft1P53798 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fdft1P53798 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Fdft1P53798 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.54□□□□□ -0.56
Fdft1P53798 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Fdft1P53798 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm15711-201ENSMUST00000118889 535 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.53□□□□□ -0.56
Fdft1P53798 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Mir7677-201ENSMUST00000184226 67 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Gm28686-201ENSMUST00000187404 609 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Rps4l-202ENSMUST00000204242 789 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm26448-201ENSMUST00000082446 203 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.53□□□□□ -0.56
Fdft1P53798 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fdft1P53798 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.53□□□□□ -0.56
Fdft1P53798 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms