Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.67□□□□□ -0.54
Lhx3P50481 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Btrc-209ENSMUST00000224478 2194 ntBASIC11.67□□□□□ -0.54
Lhx3P50481 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.67□□□□□ -0.54
Lhx3P50481 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.67□□□□□ -0.54
Lhx3P50481 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.67□□□□□ -0.54
Lhx3P50481 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.67□□□□□ -0.54
Lhx3P50481 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.67□□□□□ -0.54
Lhx3P50481 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.67□□□□□ -0.54
Lhx3P50481 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.67□□□□□ -0.54
Lhx3P50481 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lhx3P50481 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.67□□□□□ -0.54
Lhx3P50481 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.67□□□□□ -0.54
Lhx3P50481 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx3P50481 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lhx3P50481 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lhx3P50481 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.66□□□□□ -0.54
Lhx3P50481 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Gm15528-201ENSMUST00000117821 864 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm15617-201ENSMUST00000118973 771 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm14460-201ENSMUST00000121511 639 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.66□□□□□ -0.54
Lhx3P50481 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.66□□□□□ -0.54
Lhx3P50481 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.66□□□□□ -0.54
Lhx3P50481 Gm3508-201ENSMUST00000186012 792 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm37826-201ENSMUST00000195329 322 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm45550-201ENSMUST00000209380 946 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.66□□□□□ -0.54
Lhx3P50481 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx3P50481 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms