Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SftpbP50405 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.78□□□□□ -0.52
SftpbP50405 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.78□□□□□ -0.52
SftpbP50405 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.78□□□□□ -0.52
SftpbP50405 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SftpbP50405 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.78□□□□□ -0.52
SftpbP50405 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SftpbP50405 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SftpbP50405 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.77□□□□□ -0.52
SftpbP50405 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SftpbP50405 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SftpbP50405 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.77□□□□□ -0.53
SftpbP50405 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SftpbP50405 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.77□□□□□ -0.53
SftpbP50405 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 AA914427-201ENSMUST00000193194 1166 ntBASIC11.77□□□□□ -0.53
SftpbP50405 Gm6450-201ENSMUST00000200896 574 ntBASIC11.77□□□□□ -0.53
SftpbP50405 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.77□□□□□ -0.53
SftpbP50405 Gm807-202ENSMUST00000224929 408 ntBASIC11.77□□□□□ -0.53
SftpbP50405 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.77□□□□□ -0.53
SftpbP50405 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SftpbP50405 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SftpbP50405 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SftpbP50405 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.76□□□□□ -0.53
SftpbP50405 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.76□□□□□ -0.53
SftpbP50405 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SftpbP50405 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.76□□□□□ -0.53
SftpbP50405 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Gm18065-201ENSMUST00000221395 526 ntBASIC11.76□□□□□ -0.53
SftpbP50405 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.76□□□□□ -0.53
SftpbP50405 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SftpbP50405 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.76□□□□□ -0.53
SftpbP50405 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
SftpbP50405 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SftpbP50405 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.75□□□□□ -0.53
SftpbP50405 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SftpbP50405 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.75□□□□□ -0.53
SftpbP50405 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms