Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm7940-201ENSMUST00000218195 769 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm15276-201ENSMUST00000145953 498 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm5616-201ENSMUST00000165252 384 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm8741-201ENSMUST00000174736 384 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm13097-201ENSMUST00000210722 397 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.11□□□□□ -0.63
Tnfsf4P43488 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsf4P43488 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsf4P43488 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Gm11509-201ENSMUST00000117358 325 ntBASIC11.1□□□□□ -0.63
Tnfsf4P43488 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsf4P43488 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.1□□□□□ -0.63
Tnfsf4P43488 Gm25700-201ENSMUST00000177693 110 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms