Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Hist1h1aP43275 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hist1h1aP43275 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hist1h1aP43275 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm14644-201ENSMUST00000116671 647 ntBASIC9.52□□□□□ -0.89
Hist1h1aP43275 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.52□□□□□ -0.89
Hist1h1aP43275 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm3096-201ENSMUST00000185770 364 ntBASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm43002-201ENSMUST00000200310 155 ntBASIC9.52□□□□□ -0.89
Hist1h1aP43275 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hist1h1aP43275 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm12957-201ENSMUST00000117835 377 ntBASIC9.51□□□□□ -0.89
Hist1h1aP43275 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm19187-201ENSMUST00000206781 892 ntBASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm18054-201ENSMUST00000207539 555 ntBASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.51□□□□□ -0.89
Hist1h1aP43275 Gm18935-201ENSMUST00000212692 664 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms