Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm25343-201ENSMUST00000157460 107 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm29067-201ENSMUST00000190821 470 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm37207-201ENSMUST00000194284 296 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm18010-201ENSMUST00000203553 202 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cxcl12P40224 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.87□□□□□ -0.51
Cxcl12P40224 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm27440-201ENSMUST00000184785 107 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm29808-201ENSMUST00000194419 468 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm33707-201ENSMUST00000195135 569 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm30946-201ENSMUST00000198288 724 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm26782-203ENSMUST00000227103 751 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Gm25580-201ENSMUST00000083409 327 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.86□□□□□ -0.51
Cxcl12P40224 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Cxcl12P40224 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.86□□□□□ -0.51
Cxcl12P40224 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cxcl12P40224 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm9133-201ENSMUST00000118289 540 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm15374-201ENSMUST00000119313 844 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm14113-201ENSMUST00000121399 976 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm15982-201ENSMUST00000121681 554 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm45310-201ENSMUST00000210436 275 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcl12P40224 Gm18041-201ENSMUST00000218210 618 ntBASIC11.85□□□□□ -0.51
Cxcl12P40224 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms