Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.4□□□□□ -0.26
Traf1P39428 Gm15615-201ENSMUST00000118876 198 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Gm1848-201ENSMUST00000120711 789 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Gm7741-201ENSMUST00000181445 989 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.4□□□□□ -0.26
Traf1P39428 Gm8574-201ENSMUST00000203207 924 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Gm7600-201ENSMUST00000209657 785 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Gm8342-201ENSMUST00000209839 757 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Gm2875-201ENSMUST00000211333 360 ntBASIC13.4□□□□□ -0.26
Traf1P39428 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Traf1P39428 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Traf1P39428 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Traf1P39428 Olfr584-201ENSMUST00000098210 964 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Traf1P39428 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.4□□□□□ -0.26
Traf1P39428 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Traf1P39428 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Traf1P39428 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Traf1P39428 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Traf1P39428 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Traf1P39428 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Gm11244-201ENSMUST00000121243 237 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Traf1P39428 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.39□□□□□ -0.27
Traf1P39428 Gm42518-201ENSMUST00000196277 938 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.39□□□□□ -0.27
Traf1P39428 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.39□□□□□ -0.27
Traf1P39428 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Traf1P39428 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Traf1P39428 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.39□□□□□ -0.27
Traf1P39428 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Traf1P39428 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Traf1P39428 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms