Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh4P39038 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Gm8731-201ENSMUST00000118088 412 ntBASIC11.09□□□□□ -0.63
Cdh4P39038 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdh4P39038 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh4P39038 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdh4P39038 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh4P39038 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.09□□□□□ -0.63
Cdh4P39038 Gm9555-201ENSMUST00000200908 583 ntBASIC11.09□□□□□ -0.63
Cdh4P39038 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.09□□□□□ -0.63
Cdh4P39038 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.09□□□□□ -0.63
Cdh4P39038 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Cdh4P39038 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.09□□□□□ -0.63
Cdh4P39038 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh4P39038 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cdh4P39038 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh4P39038 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.08□□□□□ -0.63
Cdh4P39038 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.08□□□□□ -0.63
Cdh4P39038 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdh4P39038 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdh4P39038 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cdh4P39038 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Gm15595-201ENSMUST00000120840 961 ntBASIC11.08□□□□□ -0.64
Cdh4P39038 Gm15432-201ENSMUST00000121106 195 ntBASIC11.08□□□□□ -0.64
Cdh4P39038 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cdh4P39038 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Gm20426-201ENSMUST00000173657 440 ntBASIC11.08□□□□□ -0.64
Cdh4P39038 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdh4P39038 Gm37835-201ENSMUST00000193305 361 ntBASIC11.08□□□□□ -0.64
Cdh4P39038 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.08□□□□□ -0.64
Cdh4P39038 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdh4P39038 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdh4P39038 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdh4P39038 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh4P39038 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh4P39038 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdh4P39038 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm13611-201ENSMUST00000118269 318 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms