Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp4P35123 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Usp4P35123 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.12□□□□□ -0.47
Usp4P35123 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.12□□□□□ -0.47
Usp4P35123 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Gm8885-201ENSMUST00000189382 598 ntBASIC12.12□□□□□ -0.47
Usp4P35123 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.12□□□□□ -0.47
Usp4P35123 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.12□□□□□ -0.47
Usp4P35123 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.12□□□□□ -0.47
Usp4P35123 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp4P35123 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp4P35123 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Usp4P35123 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.11□□□□□ -0.47
Usp4P35123 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Usp4P35123 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Usp4P35123 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Usp4P35123 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm12217-201ENSMUST00000118858 696 ntBASIC12.11□□□□□ -0.47
Usp4P35123 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Mir5120-201ENSMUST00000175020 78 ntBASIC12.11□□□□□ -0.47
Usp4P35123 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Usp4P35123 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.11□□□□□ -0.47
Usp4P35123 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.11□□□□□ -0.47
Usp4P35123 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.11□□□□□ -0.47
Usp4P35123 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.11□□□□□ -0.47
Usp4P35123 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm10312-201ENSMUST00000078515 489 ntBASIC12.11□□□□□ -0.47
Usp4P35123 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.11□□□□□ -0.47
Usp4P35123 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
Usp4P35123 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp4P35123 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Usp4P35123 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp4P35123 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp4P35123 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp4P35123 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp4P35123 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp4P35123 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.1□□□□□ -0.47
Usp4P35123 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.1□□□□□ -0.47
Usp4P35123 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp4P35123 Gm12566-201ENSMUST00000121479 359 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms