Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6bP23440 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.68□□□□□ -0.38
Pde6bP23440 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6bP23440 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Pde6bP23440 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6bP23440 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.67□□□□□ -0.38
Pde6bP23440 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pde6bP23440 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pde6bP23440 Gm14942-201ENSMUST00000119642 336 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.67□□□□□ -0.38
Pde6bP23440 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pde6bP23440 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Gm45113-201ENSMUST00000207518 165 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Gm7940-201ENSMUST00000218195 769 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pde6bP23440 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.67□□□□□ -0.38
Pde6bP23440 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pde6bP23440 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6bP23440 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.67□□□□□ -0.38
Pde6bP23440 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pde6bP23440 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6bP23440 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm14716-201ENSMUST00000120138 718 ntBASIC12.66□□□□□ -0.38
Pde6bP23440 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm37028-201ENSMUST00000194276 107 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms