Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TP20293 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TP20293 Gm7857-201ENSMUST00000117957 358 ntBASIC10.91□□□□□ -0.66
TP20293 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.91□□□□□ -0.66
TP20293 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
TP20293 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.91□□□□□ -0.66
TP20293 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TP20293 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.91□□□□□ -0.66
TP20293 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.91□□□□□ -0.66
TP20293 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TP20293 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.91□□□□□ -0.66
TP20293 Gm9797-202ENSMUST00000218003 294 ntBASIC10.91□□□□□ -0.66
TP20293 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.91□□□□□ -0.66
TP20293 Gm807-202ENSMUST00000224929 408 ntBASIC10.91□□□□□ -0.66
TP20293 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
TP20293 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.91□□□□□ -0.66
TP20293 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
TP20293 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TP20293 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.91□□□□□ -0.66
TP20293 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TP20293 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
TP20293 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.9□□□□□ -0.66
TP20293 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Gm12857-201ENSMUST00000117678 592 ntBASIC10.9□□□□□ -0.66
TP20293 Gm14724-201ENSMUST00000118400 537 ntBASIC10.9□□□□□ -0.66
TP20293 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.9□□□□□ -0.66
TP20293 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.9□□□□□ -0.66
TP20293 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.9□□□□□ -0.66
TP20293 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.9□□□□□ -0.66
TP20293 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
TP20293 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Gm5363-201ENSMUST00000211927 938 ntBASIC10.9□□□□□ -0.66
TP20293 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.9□□□□□ -0.66
TP20293 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TP20293 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TP20293 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.9□□□□□ -0.67
TP20293 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TP20293 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TP20293 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TP20293 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.9□□□□□ -0.67
TP20293 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.9□□□□□ -0.67
TP20293 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
TP20293 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TP20293 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.89□□□□□ -0.67
TP20293 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TP20293 Gm12196-201ENSMUST00000120954 262 ntBASIC10.89□□□□□ -0.67
TP20293 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.89□□□□□ -0.67
TP20293 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.89□□□□□ -0.67
TP20293 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms