Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmga1P17095 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmga1P17095 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmga1P17095 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmga1P17095 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmga1P17095 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hmga1P17095 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmga1P17095 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmga1P17095 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmga1P17095 Gm12791-201ENSMUST00000120788 655 ntBASIC11.74□□□□□ -0.53
Hmga1P17095 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.74□□□□□ -0.53
Hmga1P17095 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.74□□□□□ -0.53
Hmga1P17095 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.74□□□□□ -0.53
Hmga1P17095 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hmga1P17095 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmga1P17095 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.74□□□□□ -0.53
Hmga1P17095 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmga1P17095 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmga1P17095 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmga1P17095 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Gm12274-201ENSMUST00000120062 385 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Gm12990-201ENSMUST00000120372 468 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmga1P17095 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmga1P17095 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmga1P17095 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmga1P17095 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmga1P17095 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmga1P17095 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Gm16380-201ENSMUST00000077997 478 ntBASIC11.73□□□□□ -0.53
Hmga1P17095 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmga1P17095 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmga1P17095 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmga1P17095 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmga1P17095 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Hmga1P17095 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmga1P17095 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms