Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr1O70481 Gm12418-201ENSMUST00000118116 942 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr1O70481 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 Gm25677-201ENSMUST00000174983 72 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Gm26119-201ENSMUST00000175601 104 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 Gm33080-201ENSMUST00000205429 172 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ubr1O70481 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ubr1O70481 Gm10580-201ENSMUST00000097985 396 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Gm10582-201ENSMUST00000097987 396 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Gm10583-201ENSMUST00000097988 396 ntBASIC14.72□□□□□ -0.05
Ubr1O70481 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr1O70481 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr1O70481 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ubr1O70481 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ubr1O70481 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ubr1O70481 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.71□□□□□ -0.05
Ubr1O70481 Gm13204-201ENSMUST00000120110 821 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Gm37723-201ENSMUST00000194480 565 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 Gm43854-201ENSMUST00000200418 394 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 Gm45094-201ENSMUST00000207013 617 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.71□□□□□ -0.05
Ubr1O70481 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.71□□□□□ -0.05
Ubr1O70481 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ubr1O70481 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ubr1O70481 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ubr1O70481 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.71□□□□□ -0.06
Ubr1O70481 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ubr1O70481 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ubr1O70481 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ubr1O70481 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.7□□□□□ -0.06
Ubr1O70481 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ubr1O70481 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Ubr1O70481 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.7□□□□□ -0.06
Ubr1O70481 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.7□□□□□ -0.06
Ubr1O70481 Gm25226-201ENSMUST00000158198 123 ntBASIC14.7□□□□□ -0.06
Ubr1O70481 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC14.7□□□□□ -0.06
Ubr1O70481 Gm24954-201ENSMUST00000178831 110 ntBASIC14.7□□□□□ -0.06
Ubr1O70481 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.7□□□□□ -0.06
Ubr1O70481 Gm7238-201ENSMUST00000206467 973 ntBASIC14.7□□□□□ -0.06
Ubr1O70481 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ubr1O70481 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ubr1O70481 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms