Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm14993-201ENSMUST00000121180 164 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm11354-201ENSMUST00000121974 422 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.7□□□□□ -0.38
Trdmt1O55055 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm37365-201ENSMUST00000193109 409 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm7902-201ENSMUST00000198842 947 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm26670-202ENSMUST00000226862 340 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm8181-201ENSMUST00000062242 669 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.7□□□□□ -0.38
Trdmt1O55055 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdmt1O55055 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trdmt1O55055 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm12663-201ENSMUST00000118481 958 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm11578-201ENSMUST00000118530 459 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm11979-201ENSMUST00000119629 743 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm13284-201ENSMUST00000121020 547 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm22846-201ENSMUST00000157706 270 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdmt1O55055 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.69□□□□□ -0.38
Trdmt1O55055 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms