Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
B020004C17RikJ3QP07 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
B020004C17RikJ3QP07 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm23745-201ENSMUST00000104230 125 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm4917-201ENSMUST00000121452 650 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm3329-201ENSMUST00000159873 556 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Trav11n-201ENSMUST00000200113 343 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm43969-201ENSMUST00000204833 535 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
B020004C17RikJ3QP07 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms