Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm29615-201ENSMUST00000185371 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28224-201ENSMUST00000186078 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm29001-201ENSMUST00000186177 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28292-201ENSMUST00000186593 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28101-201ENSMUST00000187608 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm29076-201ENSMUST00000187689 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28302-201ENSMUST00000187931 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28646-201ENSMUST00000188220 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28205-201ENSMUST00000189177 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm29032-201ENSMUST00000189797 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm28695-201ENSMUST00000190300 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm37448-201ENSMUST00000192795 697 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm26448-201ENSMUST00000082446 203 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh9F8VPK8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm12463-201ENSMUST00000118271 849 ntBASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm44008-201ENSMUST00000204345 412 ntBASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm45113-201ENSMUST00000207518 165 ntBASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gm270-201ENSMUST00000223010 976 ntBASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh9F8VPK8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms