Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb3S4R1G7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm22133-201ENSMUST00000102082 109 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm44364-201ENSMUST00000198368 141 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm45865-201ENSMUST00000211815 945 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.41□□□□□ -0.74
H2afb3S4R1G7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
H2afb3S4R1G7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm14381-201ENSMUST00000122105 414 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms