Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Gm3329-201ENSMUST00000159873 556 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Mir6979-201ENSMUST00000183927 56 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Mir7032-201ENSMUST00000185154 79 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mbd1Q9Z2E2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm11628-201ENSMUST00000117568 171 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm14130-201ENSMUST00000118417 987 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm11783-201ENSMUST00000119549 885 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mbd1Q9Z2E2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mbd1Q9Z2E2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Gm16505-201ENSMUST00000179981 232 ntBASIC11.77□□□□□ -0.53
Mbd1Q9Z2E2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms