Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Skp2Q9Z0Z3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm43962-201ENSMUST00000203898 190 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm10254-201ENSMUST00000052888 867 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Skp2Q9Z0Z3 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Mir8109-201ENSMUST00000184375 117 ntBASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm32999-201ENSMUST00000192693 562 ntBASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Rprl1-202ENSMUST00000198476 238 ntBASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Skp2Q9Z0Z3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms