Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Gm5982-201ENSMUST00000196234 512 ntBASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ercc4Q9QZD4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm6450-201ENSMUST00000200896 574 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm6082-201ENSMUST00000215204 454 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ercc4Q9QZD4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ercc4Q9QZD4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms